How to Use the qPCR Efficiency Calculator
Step 1: Enter your standard curve data. For each dilution enter the logโโ of the concentration (e.g. if you used 10โถ copies enter 6) and the corresponding average Ct value.
Step 2: Use at least 3 data points for a valid result. 5 points across a 5-log range is the recommended standard.
Step 3: Click Calculate. The tool performs linear regression to find the slope and Rยฒ of your standard curve, then calculates efficiency from the slope.
qPCR Efficiency Formula
E = (10^(-1/slope) - 1) ร 100%
// Ideal values:
Efficiency = 90โ110% (ideal: 100%)
Slope = โ3.1 to โ3.6 (ideal: โ3.32)
Rยฒ = โฅ 0.99 (ideal: 1.0)
// At 100% efficiency each cycle doubles DNA:
E = 100% โ slope = โ3.322
Troubleshooting Poor Efficiency
If efficiency is below 90% check for PCR inhibitors in your sample, suboptimal primer design or problems with the standard curve dilutions. If efficiency is above 110% check for pipetting errors or primer dimers in your no-template control.